Nobel Prize in chemistry honors 3 scientists who used AI to design proteins — life’s building blocks

Nobel Prize in chemistry honors 3 scientists who used AI to design proteins — life’s building blocks
Combination image showing this year's winners of the Nobel Prize in chemistry: University of Washington computational biologist professor David Baker (left) at his lab in Seattle, Washington, and Demis Hassabis and John M. Jumper at the offices of Google DeepMind UK in London, Britain, on October 9, 2024. (REUTERS/AFP photos)
Short Url
Updated 10 October 2024
Follow

Nobel Prize in chemistry honors 3 scientists who used AI to design proteins — life’s building blocks

Nobel Prize in chemistry honors 3 scientists who used AI to design proteins — life’s building blocks
  • David Baker created a computer program called Rosetta that helped analyze information about existing proteins in comprehensive databases to build new proteins that don’t exist in nature
  • Demis Hassabis and John Jumper created an artificial intelligence model that has predicted the structure of virtually all the 200 million proteins that researchers have ever identified

LONDON: Three scientists who discovered powerful techniques to decode and even design novel proteins — the building blocks of life — were awarded the Nobel Prize in chemistry Wednesday. Their work used advanced technologies, including artificial intelligence, and holds the potential to transform how new drugs and other materials are made.
The prize was awarded to David Baker, a biochemist at the University of Washington in Seattle, and to Demis Hassabis and John Jumper, computer scientists at Google DeepMind, a British-American artificial intelligence research laboratory based in London.
Heiner Linke, chair of the Nobel Committee for Chemistry, said the award honored research that unraveled “a grand challenge in chemistry, and in particular in biochemistry, for decades.”
“It’s that breakthrough that gets awarded today,” he said.
What is the 2024 Nobel Prize in Chemistry for?
Proteins are complex molecules with thousands of atoms that twist, turn, loop and spiral in a countless array of shapes that determine their biological function. For decades, scientists have dreamed of being able to efficiently design and build new proteins.
Baker, 62, whose work has received funding from the National Institutes of Health since the 1990s, created a computer program called Rosetta that helped analyze information about existing proteins in comprehensive databases to build new proteins that don’t exist in nature.
“It seems that you can almost construct any type of protein now with this technology,” said Johan Åqvist of the Nobel committee.
Hassabis, 48, and Jumper, 39, created an artificial intelligence model that has predicted the structure of virtually all the 200 million proteins that researchers have ever identified.
The duo “managed to crack the code. With skillful use of artificial intelligence, they made it possible to predict the complex structure of essentially any known protein in nature,” Linke said.

Why does this work matter?
The ability to custom design new proteins — and better understand existing proteins — could enable researchers to create new kinds of medicines and vaccines.
It could also allow scientists to design new enzymes to break down plastics or other waste materials that would neutralize pollution, Baker told a news conference, or even come up with entirely new material for semi conductors.
“I think there’s fantastic prospects for making better medicines — medicines that are smarter, that only work in the right time and place in the body,” Baker told The Associated Press.
One example is a potential nasal spray that could slow or stop the rapid spread of specific viruses, such as COVID-19, he said. Another is a medicine to disrupt the cascade of symptoms known as cytokine storm.
“That was always the holy grail. If you could figure out how protein sequences folded into their particular structures, then it might be possible to design protein sequences to fold into previously never seen structures that might be useful for us,” said Jon Lorsch, a director at the NIH.
How did the winners react?
Baker told the AP he found out he won the Nobel during the early hours of the morning alongside his wife, who immediately started screaming.
“So it was a little deafening, too,” he said.




Computational biologist professor David Baker speaks to coworkers at the University of Washington in Seattle after receiving the 2024 Nobel Prize in chemistry on October 09, 2024. (Getty Images/AFP)

Hassabis said he was just having a “normal morning” at home when he eventually got the call.
The Nobel committee didn’t initially have his number and first managed to get hold of his wife, but she hung up on them a few times, he told an online news briefing.
“They kept persisting and then I think she realized it was a Swedish number and then they asked for my number,” he said.
“It’s so incredible. It’s so unreal at this moment,” said Jumper, a researcher and director at Google DeepMind. “And it’s wonderful.”
What was the role of AI?
One of Britain’s leading tech figures, Hassabis co-founded the AI research lab DeepMind in 2010, which was acquired by Google in 2014. Among its past breakthroughs was developing an AI system that mastered the Chinese game Go and defeated the game’s human world champion.
In the past researchers labored for months or years to decode the structure of a single complex protein.
But the AI model created by the DeepMind researchers, called AlphaFold, “can determine the structure of a protein pretty accurately within a few seconds or minutes,” Hassabis told the AP in an interview, adding that this saves researchers “years of potentially painstaking experimental work.”
The two research groups learned from each other’s work.




Johan Aqvist, member of the Nobel Committee for Chemistry, Hans Ellegren, permanent secretary and Heiner Linke, committee chairman award this year's Nobel Prize in Chemistry to David Baker, Demis Hassabis, and John Jumper at the Royal Swedish Academy of Sciences, in Stockholm, Sweden, on Oct. 9, 2024. (TT News Agency via AP)

Baker said Hassabis and Jumper’s artificial intelligence work gave his team a huge boost.
“The breakthroughs made by Demis and John on protein structure prediction really highlighted to us the power that AI could have,” said Baker. “And that led us to apply these AI methods to protein design.”
Science has sped up, said Jumper. “It is a key demonstration that AI will make science faster “
It’s the second Nobel prize this year awarded to someone with links to artificial intelligence research at Google.
Nobel physics prize winner Geoffrey Hinton, 76, often called the “godfather of AI,” also worked at the California-based tech company until quitting so he could speak more openly about the potential downsides of AI.
“I’m hoping AI will lead to tremendous benefits,” Hinton told a news conference Tuesday. “I’m convinced that it will do that in health care.”
“My worry is that it may also lead to bad things. And in particular, when we get things more intelligent than ourselves, no one really knows whether we’re going to be able to control them.”
More about the Nobels
Wednesday’s chemistry prize winners represent a younger generation taking forward the work of the AI pioneers honored for physics, said Michael Kearns, a computer scientist at the University of Pennsylvania.
They are making AI models “scalable and practical and applying it to very important scientific problems.”
Baker gets half of the 11 million Swedish Kronor ($1 million) prize money, while Hassabis and Jumper share the other half.
The Nobel announcements opened Monday with medical researchers Victor Ambros and Gary Ruvkun winning the medicine prize. Hinton and fellow AI pioneer John Hopfield, 91, won the physics prize.
The awards continue with the literature prize Thursday, the Nobel Peace Prize Friday and the economics award on Oct. 14.
The prize money comes from a bequest by the award’s creator, Swedish inventor Alfred Nobel. The laureates are invited to receive their awards at ceremonies on Dec. 10, the anniversary of Nobel’s death.


Bangladesh’s air force chief seeks stronger defense ties with Saudi Arabia, UAE

Bangladesh’s air force chief seeks stronger defense ties with Saudi Arabia, UAE
Updated 09 February 2025
Follow

Bangladesh’s air force chief seeks stronger defense ties with Saudi Arabia, UAE

Bangladesh’s air force chief seeks stronger defense ties with Saudi Arabia, UAE
  • Air Chief Marshal Hasan Mahmood Khan will be in the Kingdom until Feb. 13
  • Dhaka seeks to take defense relations to ‘next level’ with the Gulf trip

DHAKA: Bangladesh’s Air Force chief began a multi-day visit to Saudi Arabia and the UAE on Sunday, a trip expected to strengthen Dhaka’s defense ties with the Gulf states.

Air Marshal Hasan Mahmood Khan arrived in Riyadh on Sunday, where he is due to hold talks with top officials at the Royal Saudi Air Force, including his counterpart, Lt. Gen. Turki bin Bandar bin Abdulaziz.

Khan will also visit RSAF’s bases and establishments as part of his trip to the Kingdom, according to the public relations division of the Bangladesh Armed Forces, ISPR.

“The visit of our air chief marshal will strengthen defense cooperation between Bangladesh and Saudi Arabia,” ISPR Director Lt. Col. Sami Ud Dowla Chowdhury told Arab News.

“Khan will discuss opportunities for increasing collaboration in the area of joint exercise and training. The visit will definitely pave the way for closer cooperation between the two air forces in the coming days.”

Dhaka and Riyadh signed in 2019 an agreement to further their military cooperation, which has served as a basis for their collaborations in the field.

From Saudi Arabia, Khan will continue his Gulf trip to the UAE on Feb. 14 to meet his Emirati counterpart, Maj. Gen. Staff Pilot Ibrahim Nasser Mohamed Al-Alawi, and discuss “various bilateral issues of mutual interest.”

Both Saudi Arabia and the UAE are “very important countries” in the Gulf region, Chowdhury said.

“We have been enjoying excellent relationships with both countries. With this visit, we can say our defense cooperation will be further enhanced.”


31 Maoists, two Indian soldiers killed in gunfight— police 

31 Maoists, two Indian soldiers killed in gunfight— police 
Updated 09 February 2025
Follow

31 Maoists, two Indian soldiers killed in gunfight— police 

31 Maoists, two Indian soldiers killed in gunfight— police 
  • Over 10,000 have been killed in decades-long insurgency waged by rebels
  • Maoists demand land, jobs and share of central India’s natural resources for locals 

New Delhi: At least 31 Maoist rebels and two Indian commandos were killed in a gunfight in the dense jungles of central India Sunday, as security forces ramp up efforts to crush the long-running insurgency.

More than 10,000 people have been killed in the decades-long insurgency waged by the rebels, who say they are fighting for the rights of marginalized Indigenous people.

“31 rebels and two security personnel are dead and two other security personnel are injured,” senior police officer Sundarraj P. told AFP.

The official said the toll could be even higher as the police continue to carry out search operations in the area.

“Additional forces have been rushed to the encounter site,” he said.

Police have recovered automatic weapons and grenade launchers from the scene, a police statement said.

The gunfight broke in the forested areas of Bijapur district in the state of Chhattisgarh, considered the heartland of the insurgency.

“This is a big success in the direction of achieving a Naxal-free India,” said Amit Shah, India’s home minister, who last year said the government expected to crush the rebellion by 2026.

A crackdown by security forces has killed some 287 rebels in the past year, an overwhelming majority in Chhattisgarh, according to government data.

The Maoists demand land, jobs and a share of the region’s immense natural resources for local residents.

They made inroads in a number of remote communities across India’s east and south, and the movement gained in strength and numbers until the early 2000s.

New Delhi then deployed tens of thousands of troops in a stretch of territory known as the “Red Corridor.”

The conflict has also seen a number of deadly attacks on government forces. A roadside bomb killed at least nine Indian troops last month.
 


Trump says he has spoken to Putin about ending the Ukraine war

Trump says he has spoken to Putin about ending the Ukraine war
Updated 09 February 2025
Follow

Trump says he has spoken to Putin about ending the Ukraine war

Trump says he has spoken to Putin about ending the Ukraine war
  • Trump said last week that the war was a bloodbath and that his team had had ‘some very good talks’
  • US president has repeatedly said he wants to end the war and that he will meet Putin to discuss it

MOSCOW: US President Donald Trump said he has spoken to Russian President Vladimir Putin by phone about ending the war in Ukraine, the New York Post reported, the first known direct conversation between Putin and a USpresident since early 2022.

Trump, who has promised to end the war in Ukraine but not yet set out in public how he would do so, said last week that the war was a bloodbath and that his team had had “some very good talks.”

In an interview aboard Air Force One on Friday Trump told the New York Post that he had “better not say,” when asked how many times he and Putin had spoken.

“He (Putin) wants to see people stop dying,” Trump told the New York Post. The White House did not respond to a request for comment outside normal business hours.

Kremlin spokesman Dmitry Peskov told the TASS state news agency that “many different communications are emerging.”

“These communications are conducted through different channels,” Peskov said when asked by TASS to comment directly on the New York Post report. “I personally may not know something, be unaware of something. Therefore, in this case, I can neither confirm nor deny it.”

The conflict in eastern Ukraine began in 2014 after a pro-Russian president was toppled in Ukraine’s Maidan Revolution and Russia annexed Crimea, with Russian-backed separatist forces fighting Ukraine’s armed forces.

Putin sent thousands of troops into Ukraine in 2022, calling it a “special military operation” to protect Russian speakers in Ukraine and counter what he said was a grave threat to Russia from potential Ukrainian membership of NATO.

Ukraine and its Western backers, led by the United States, said the invasion was an imperial style land grab and vowed to defeat Russian forces.

Moscow controls a chunk of Ukraine about the size of the American state of Virginia and is advancing at the fastest pace since the early days of the 2022 invasion.

Trump-Putin summit?

Trump, author of the 1987 book “Trump: the Art of the Deal,” has repeatedly said he wants to end the war and that he will meet Putin to discuss it, though the date or venue for a summit is still not publicly known.

Saudi Arabia and the United Arab Emirates are seen by Russia as possible venues for a summit, Reuters reported earlier this month.

On June 14, Putin set out his opening terms for an immediate end to the war: Ukraine must drop its NATO ambitions and withdraw its troops from the entirety of the territory of four Ukrainian regions claimed and mostly controlled by Russia.

Reuters reported in November that Putin is open to discussing a Ukraine peace deal with Trump but rules out making any major territorial concessions and insists Kyiv abandon ambitions to join NATO.

The Kremlin has repeatedly urged caution over speculation about contacts with the Trump team over a possible peace deal.

Leonid Slutsky, head of the Russian parliament’s international affairs committee, was cited by the state RIA news agency on Thursday as saying that preparations for such a meeting were at “an advanced stage” and that it could take place in February or March.

Putin last spoke to former US President Joe Biden in February 2022, shortly before Putin ordered thousands of troops into Ukraine. The two leaders spoke for about an hour then, the Kremlin said.

Washington Post journalist Bob Woodward, in his 2024 book “War,” reported that Trump had direct conversations as many as seven times with Putin after he left the White House in 2021.

Asked if that were true in an interview to Bloomberg last year, Trump said: “If I did, it’s a smart thing.” The Kremlin denied Woodward’s report.

On Friday, Trump said he would probably meet Ukrainian President Volodymyr Zelensky next week to discuss ending the war.

Trump told the New York Post that he has “always had a good relationship with Putin” and that he has a concrete plan to end the war. But he did not disclose further details.

“I hope it’s fast,” Trump said. “Every day people are dying. This war is so bad in Ukraine. I want to end this damn thing.”


One dead, dozens missing in China landslide

One dead, dozens missing in China landslide
Updated 09 February 2025
Follow

One dead, dozens missing in China landslide

One dead, dozens missing in China landslide
  • China has been hit with extreme weather in recent months, with dozens of people killed in floods last year
  • Scientists say climate change is making extreme weather events more frequent

SHANGHAI: A landslide in China’s southwestern Sichuan province triggered by heavy rain has killed at least one person, with nearly 30 more missing, state media said Sunday.
China has been hit with extreme weather in recent months, with dozens of people killed in floods last year, its warmest on record.
Scientists say climate change is making extreme weather events more frequent.
Saturday’s landslide hit Jinping village in the city of Yibin at around 11:50 a.m. (0350 GMT).
As of Sunday morning, “one person has been killed and 28 people are missing,” state news agency Xinhua said.
Two people were saved on Saturday and more than 900 rescuers are attempting to find the rest of the missing people, Xinhua said.
Video footage published by state broadcaster CCTV earlier on Sunday showed rescuers with flashlights searching through debris in the dark.
“A preliminary study shows this disaster occurred due to the influence of recent prolonged rainfall and geological factors,” CCTV said, citing local authorities.
President Xi Jinping ordered authorities on Saturday to do “everything possible to search for and rescue missing people, minimize casualties, and properly handle the aftermath.”


Bangladesh crackdown on ex-regime loyalists

Bangladesh crackdown on ex-regime loyalists
Updated 09 February 2025
Follow

Bangladesh crackdown on ex-regime loyalists

Bangladesh crackdown on ex-regime loyalists

DHAKA: Bangladesh on Sunday launched a major security operation after protesters were attacked by gangs allegedly connected to the ousted regime of ex-leader Sheikh Hasina.
A government statement said the operation began after gangs “linked to the fallen autocratic regime attacked a group of students, leaving them severely injured.”
Jahangir Alam Chowdhury, head of the interior ministry in the interim government that took over after Hasina was ousted in the August 2024 student-led revolution, has dubbed it “Operation Devil Hunt.”
“It will continue until we uproot the devils,” Chowdhury told reporters.
The sweeping security operations come after days of unrest.
On Wednesday, six months to the day since Hasina fled as crowds stormed her palace in Dhaka, protesters smashed down buildings connected to her family using excavators.
Protests were triggered in response to reports that 77-year-old Hasina — who has defied an arrest warrant to face trial crimes against humanity — would appear in a Facebook broadcast from exile in neighboring India.
Buildings destroyed included the museum and former home of Hasina’s late father, Bangladesh’s first president Sheikh Mujibur Rahman.
The interim government blamed Hasina for the violence.
On Friday, interim leader and Nobel Peace Prize winner Muhammad Yunus also pleaded for calm.
“Respecting the rule of law is what differentiates the new Bangladesh we are working together to build, from the old Bangladesh under the fascist regime,” Yunus said in a statement.
“For the citizens who rose up and overthrew the Hasina regime ... it is imperative to prove to ourselves and our friends around the world that our commitment to our principles — respecting one another’s civil and human rights and acting under the law — is unshakable.”
Hours later, members of the Students Against Discrimination — the protest group credited with sparking the uprising against Hasina — were attacked in the Dhaka district of Gazipur.
The vocal and powerful group — whose members are in the government cabinet — had since demanded action.